CNVkit

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Description

cnvkit website  

A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing.

Required Modules

Serial

  • gcc/5.2.0
  • cnvkit

System Variables

  • HPC_{{#uppercase:cnvkit}}_DIR - installation directory
  • HPC_{{#uppercase:cnvkit}}_BIN - executable directory






Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=CNVkit&oldid=16491"