SNeP

Description

snep website  

SNeP is a piece of software written in C++ that performs historical Effective Population Size (Ne) trajectories estimation through Linkage Disequilibrium (LD). Calculations are based on genome-wide genotype data.

Required Modules

Serial

• snep

System Variables

• HPC_{{#uppercase:snep}}_DIR - installation directory

Citation

If you publish research that uses snep you have to cite it as follows:

Barbato M, Orozco-terWengel P, Tapio M and Bruford MW (2015). Front. Genet. 6:109. doi: 10.3389/fgene.2015.00109