SHRiMP

From UFRC
Revision as of 17:35, 19 September 2014 by Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BioinformaticsCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|shrimp}} |{{#vardefine:url|http://proovread.bioapps.biozent...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

shrimp website  

SHRiMP is a software package for aligning genomic reads against a target genome. It was primarily developed with the multitudinous short reads of next generation sequencing machines in mind, as well as Applied Biosystem's colourspace genomic representation.

Required Modules

Serial

  • shrimp

System Variables

  • HPC_{{#uppercase:shrimp}}_DIR