Popcorn
Revision as of 22:20, 8 March 2022 by Cabreraruizdiazj (talk | contribs)
Description
Popcorn is a program for estimaing the correlation of causal variant effect sizes across populations in GWAS.
Environment Modules
Run module spider popcorn
to find out what environment modules are available for this application.
System Variables
- HPC_POPCORN_DIR - installation directory
- HPC_POPCORN_BIN - executable directory
Usage Examples
$ python /apps/popcorn/20211104/lib/popcorn/__main__.py compute --bfile /path/to/input/EAS_ref EAS.cscore