Newbler

From UFRC
Revision as of 17:22, 10 August 2012 by Moskalenko (talk | contribs) (Text replace - "<!--Run-->" to "==System Variables== * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory <!--Run--> ")
Jump to navigation Jump to search

Description

newbler website  

Newbler is a software package for de novo DNA sequence assembly. It is designed specifically for assembling sequence data generated by the 454 GS-series of pyrosequencing platforms sold by 454 Life Sciences, a Roche Diagnostics company.

Required Modules

modules documentation

Serial

  • newbler
  • HPC_NEWBLER_BIN - executable directory

System Variables

  • HPC_{{#uppercase:newbler}}_DIR - installation directory






Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=Newbler&oldid=8293"