CAP3

From UFRC
Revision as of 16:55, 10 August 2012 by Moskalenko (talk | contribs) (Text replace - "{{#if: {{#var: mod}}|==Execution Environment and Modules== {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}}" to "==Required Modules== modules documentation ===Serial=== *{{#var:app}}")
Jump to navigation Jump to search

Description

cap3 website  

CAP3 is a sequence assembly program. See documentation at capdoc site.

Intel processor optimized versions of cap3 and formcon are installed at HPC.

Opteron optimized versions of these binaries are named cap3-opteron and formcon-opteron.

In addition, pcap binaries are also provided.

Required Modules

modules documentation

Serial

  • cap3
  • HPC_CAP3_BIN - location of the CAP3 executables directory
  • HPC_CAP3_DOC - location of the CAP3 docs directory
  • HPC_CAP3_EXAMPLE - location of the CAP3 examples directory




Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=CAP3&oldid=8108"