Exonerate

Description

exonerate website  

• Exonerate is a generic tool for pairwise sequence comparison.
• It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics.
• If you have questions, you can email the Author.

Execution Environment and Modules

To use exonerate with the environment modules system at HPC the following commands are available:

Get module information for exonerate:

$module spider exonerate

Load the default application module:

$module load exonerate

The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:

• HPC_EXONERATE_DIR - directory where exonerate is located.