CisGenome

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Revision as of 02:02, 10 August 2012 by Moskalenko (talk | contribs) (Text replace - "==Running the application using modules==" to "==Execution Environment and Modules==")
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Description

cisgenome website  

An integrated tool for tiling array, ChIP-seq, genome and cis-regulatory element analysis.

Available versions

  • 2.0

Execution Environment and Modules

To use cisgenome with the environment modules system at HPC the following commands are available:

Get module information for cisgenome: 

$module spider cisgenome

Load the default application module: 

$module load cisgenome

The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:

  • HPC_CISGENOME_DIR - directory where cisgenome is located.
  • HPC_CISGENOME_BIN - executable directory




Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=CisGenome&oldid=7597"