STAR
Revision as of 19:22, 11 February 2021 by Moskalenko (talk | contribs) (Text replacement - "/ufrc" to "/blue")
Description
STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.
For details, please see the paper:
A. Dobin et al, Bioinformatics 2012; doi: 10.1093/bioinformatics/bts635 "STAR: ultrafast universal RNA-seq aligner"
Required Modules
Serial
- star
System Variables
- HPC_STAR_DIR
Additional Information
Make sure to set a directory for temporary files within your /blue working directory with the '--outTempDir argument to avoid job crashes and filling up diskless compute nodes. See Temporary Directories for more information.