LMAP
Revision as of 20:03, 15 August 2022 by Israel.herrera (talk | contribs)
Description
A package of user-friendly terminal/command-line and interactive applications developed in Perl, to enable the high-throughput analyses of multiple genes/datasets in PAML (codeml). LMAP was designed for the workstation multi-core environment and enables all the codeml codon substitutions models: site models, branch models, branch-site models and clade models.
Environment Modules
Run module spider lmap to find out what environment modules are available for this application.
System Variables
- HPC_LMAP_DIR - installation directory
- HPC_LMAP_BIN - executable directory
- HPC_LMAP_DOC - documentation directory
- HPC_LMAP_EXE - example directory
Citation
If you publish research that uses lmap you have to cite it as follows: