Kaiju
Revision as of 21:21, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
Kaiju is a program for the taxonomic classification of high-throughput sequencing reads, e.g., Illumina or Roche/454, from whole-genome sequencing of metagenomic DNA. Reads are directly assigned to taxa using the NCBI taxonomy and a reference database of protein sequences from microbial and viral genomes.
Environment Modules
Run module spider kaiju to find out what environment modules are available for this application.
System Variables
- HPC_KAIJU_DIR - installation directory
- HPC_KAIJU_BIN - executable directory