MEME

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Revision as of 19:40, 26 February 2018 by Brantleyk (talk | contribs)
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Description

meme website  
The MEME Suite allows you to:

  • Discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences.
  • Search sequence databases using motifs.
  • Compare a motif to all motifs in a database of motifs, and.
  • Associate motifs with Gene Ontology terms via their putative target genes.


Environment Modules

Run module spider meme to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:meme}}_DIR - installation directory
  • HPC_{{#uppercase:meme}}_BIN - executable directory
  • HPC_{{#uppercase:meme}}_DOC - documentation directory