Genesum
Revision as of 21:21, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
This is a tool to create gene-level summaries of transcript expression estimates. You provide the tool with an annotation file (in GTF/GFF format) and a set of transcript-level estimates, and it aggregates these expression estimates to the gene-level.
Environment Modules
Run module spider genesum to find out what environment modules are available for this application.
System Variables
- HPC_GENESUM_DIR - installation directory
- HPC_GENESUM_BIN - execution directory