Amphora2
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Description
An Automated Phylogenomic Inference Pipeline for Bacterial and Archaeal Sequences.
AMPHORA2 is free software: you may redistribute it and/or modify its under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or any later version.
Required Modules
Serial
- amphora2
System Variables
- HPC_{{#uppercase:amphora2}}_DIR - installation directory
- HPC_{{#uppercase:amphora2}}_BIN - executable directory
- HPC_{{#uppercase:amphora2}}_DOC - documentation directory
- HPC_{{#uppercase:amphora2}}_EXE - test data directory
- HPC_{{#uppercase:amphora2}}_TAX- taxonomy data directory
- HPC_{{#uppercase:amphora2}}_TREE - tree data directory
Citation
If you publish research that uses amphora2 you have to cite it as follows:
WRITE_CITATION_HERE