Crass

Description

crass website  

Crass is a program that searches through raw metagenomic reads for Clustered Regularly Interspersed Short Palindromic Repeats

Required Modules

Serial

• gcc/5.2.0
• crass

System Variables

• HPC_{{#uppercase:crass}}_DIR - installation directory
• HPC_{{#uppercase:crass}}_BIN - executable directory
• HPC_{{#uppercase:crass}}_DOC - documentation directory
• HPC_{{#uppercase:crass}}_MAN - manual directory

Citation

If you publish research that uses crass you have to cite it as follows:

Connor T. Skennerton, Michael Imelfort, and Gene W. Tyson Crass: identification and reconstruction of CRISPR from unassembled metagenomic data Nucl. Acids Res. (2013) 41(10): e105