BFAST: Difference between revisions

From UFRC
Jump to navigation Jump to search
← Older editNewer edit →
No edit summary
m Text replace - "<!-- ######## Template Configuration ######## --> <!--Edit definitions of the variables used in template calls Required variables: app - lowercase name of the application e.g. "amber" url - url of the software page (project, company prod
Line 2: Line 2:
__NOEDITSECTION__
__NOEDITSECTION__
[[Category:Software]][[Category:Bioinformatics]][[Category:NGS]]
[[Category:Software]][[Category:Bioinformatics]][[Category:NGS]]
<!-- ########  Template Configuration ######## -->
 
<!--Edit definitions of the variables used in template calls
Required variables:
app - lowercase name of the application e.g. "amber"
url - url of the software page (project, company product, etc) - e.g. "http://ambermd.org/"
Optional variables:
INTEL - Version of the Intel Compiler e.g. "11.1"
MPI - MPI Implementation and version e.g. "openmpi/1.3.4"
-->
{|
{|
<!--Main settings - REQUIRED-->
<!--Main settings - REQUIRED-->

Revision as of 17:51, 10 August 2012


Description

bfast website  

BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.

Required Modules

modules documentation

Serial

  • bfast

System Variables

  • HPC_{{#uppercase:bfast}}_DIR - installation directory
  • HPC_BFAST_BIN - executable directory
  • HPC_BFAST_DOC - documentation directory




Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=BFAST&oldid=8350"