Difference between revisions of "Velocyto"
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| − | [[Category:biology]][[Category:sequencing]] | + | [[Category:software]][[Category:biology]][[Category:sequencing]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|velocyto}} | |{{#vardefine:app|velocyto}} | ||
Latest revision as of 00:33, 25 May 2023
Description
Velocyto is a library for the analysis of RNA velocity.
Velocyto includes a command line tool and an analysis pipeline
Environment Modules
Run module spider velocyto to find out what environment modules are available for this application.
System Variables
- HPC_VELOCYTO_DIR - installation directory
- HPC_VELOCYTO_BIN - executable directory
Citation
If you publish research that uses velocyto you have to cite it as follows:
If you use velocyto please cite the bioarxiv preprint RNA velocity in single cells. (Note from velocyto website)