Difference between revisions of "RnaQUAST"
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| − | [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]] | + | [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]][[Category:RNA-Seq]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|rnaquast}} | |{{#vardefine:app|rnaquast}} | ||
Latest revision as of 21:57, 21 August 2022
Description
rnaQUAST is a tool for evaluating quality of transcriptome assemblies using reference genome and gene database.
Environment Modules
Run module spider rnaquast to find out what environment modules are available for this application.
System Variables
- HPC_RNAQUAST_DIR - installation directory
Citation
If you publish research that uses rnaquast you have to cite it as follows:
http://spades.bioinf.spbau.ru/rnaquast/release1.2.0/manual.html#sec5