Difference between revisions of "IsoSeq3"
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|{{#vardefine:app|isoseq3}} | |{{#vardefine:app|isoseq3}} | ||
Revision as of 19:03, 15 August 2022
Description
IsoSeq v3 contains the newest tools to identify transcripts in PacBio single-molecule sequencing data. Starting in SMRT Link v6.0.0, those tools power the IsoSeq GUI-based analysis application. A composable workflow of existing tools and algorithms, combined with a new clustering technique, allows to process the ever-increasing yield of PacBio machines with similar performance to IsoSeq versions 1 and 2.
Environment Modules
Run module spider isoseq3 to find out what environment modules are available for this application.
System Variables
- HPC_ISOSEQ3_DIR - installation directory
- HPC_ISOSEQ3_BIN - executable directory