Difference between revisions of "ChromEvol"
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| − | [[Category:Software]][[Category:Biology]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:RNA-Seq]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|chromevol}} | |{{#vardefine:app|chromevol}} | ||
Revision as of 13:28, 15 August 2022
Description
chromEvol is a free, open-source program for analyzing changes in chromosome-number along a phylogeny. Given a phylogeny and chromosome number data, the program infers the location and type of chromosome number transitions along the tree.
- Features
- Test hypotheses about chromosome numbe evolution
- Determine ploidy levels for taxa
- Find the chromosome base-number of a phylogeny
Environment Modules
Run module spider chromevol to find out what environment modules are available for this application.
System Variables
- HPC_CHROMEVOL_DIR - installation directory
Citation
If you publish research that uses chromevol you have to cite it as follows: