Difference between revisions of "Scythe"
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|{{#vardefine:app|scythe}} | |{{#vardefine:app|scythe}} | ||
Latest revision as of 20:36, 12 August 2022
Description
Scythe uses a Naive Bayesian approach to classify contaminant substrings in sequence reads. It considers quality information, which can make it robust in picking out 3'-end adapters, which often include poor quality bases.
Environment Modules
Run module spider scythe to find out what environment modules are available for this application.
System Variables
- HPC_SCYTHE_DIR - installation directory