Difference between revisions of "Flexbar"
Jump to navigation
Jump to search
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:NGS]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|flexbar}} | |{{#vardefine:app|flexbar}} | ||
Revision as of 18:55, 12 August 2022
Description
Flexbar is a program to preprocess sequencing data. It demultiplexes barcoded runs and removes adapter sequences. Further, basic read trimming and filtering options are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform.
Environment Modules
Run module spider flexbar to find out what environment modules are available for this application.
System Variables
- HPC_FLEXBAR_DIR - installation directory