Difference between revisions of "Gffread"

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m (Text replacement - "#uppercase" to "uc")
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<!--Modules-->
 
<!--Modules-->
==Required Modules==
+
==Environment Modules==
 
+
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
 
* {{#var:app}}
 
<!--
 
===Parallel (OpenMP)===
 
* intel
 
* {{#var:app}}
 
===Parallel (MPI)===
 
* intel
 
* openmpi
 
* {{#var:app}}
 
-->
 
 
==System Variables==
 
==System Variables==
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory

Revision as of 14:41, 10 June 2022

Description

gffread website  

GFF/GTF parsing utility providing format conversions, region filtering, FASTA sequence extraction and more.

Environment Modules

Run module spider gffread to find out what environment modules are available for this application.

System Variables

  • HPC_GFFREAD_DIR - installation directory