MOOSE Configuration

Configure and test your own "MOOSE" framework

Basic Steps

1. mkdir projects
2. cd projects
3. module load moose/12-aug-20
4. git clone https://github.com/idaholab/moose.git
5. cd moose
6. git checkout master
7. export VTKLIB_DIR=${HPC_VTK_LIB} VTKINCLUDE_DIR=${HPC_VTK_INC}
8. Run "./scripts/update_and_rebuild_libmesh.sh --enable-vtk-required"
9. Interrupt (ctrl-c) the above configure/build just after the git clone of libmesh is completed.
10. Patch the "configure" script using the accompanying patch file (see below).
11. Rerun "./scripts/update_and_rebuild_libmesh.sh --enable-vtk-required" and allow it to complete. It should finish without errors.
12. cd test; run_tests -j 4
13. Build and test the "phase field" module:
    1. cd moose/modules/phase_field
    2. make -j 4
    3. ./run_tests -j 4
14. Build and test the "combined" module:
    1. cd moose/modules/combined
    2. make -j 4
    3. ./run_tests -j 4

Patch File

<source lang=bash> --- a/configure 2020-08-07 07:56:18.955696774 -0400 +++ b/configure 2020-08-07 08:00:45.329361095 -0400 @@ -38452,24 +38452,26 @@

                 VTK_LIBRARY_WITH_VERSION="-L$VTK_LIB -lvtkIOCore-$vtkmajorminor -lvtkCommonCore-$vtkmajorminor -lvtkCommonDataModel-$vtkmajorminor \
                                           -lvtkFiltersCore-$vtkmajorminor -lvtkIOXML-$vtkmajorminor -lvtkImagingCore-$vtkmajorminor \
                                           -lvtkIOImage-$vtkmajorminor -lvtkImagingMath-$vtkmajorminor \

- -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor" + -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor \ + -lvtkCommonExecutionModel-$vtkmajorminor"

                                                                    VTK_LIBRARY_NO_VERSION="-L$VTK_LIB -lvtkIOCore -lvtkCommonCore -lvtkCommonDataModel \
                                         -lvtkFiltersCore -lvtkIOXML -lvtkImagingCore \
                                         -lvtkIOImage -lvtkImagingMath \

- -lvtkParallelMPI -lvtkParallelCore" + -lvtkParallelMPI -lvtkParallelCore -lvtkCommonExecutionModel"

else

                                                   VTK_LIBRARY_WITH_VERSION="-L$VTK_LIB -lvtkIOCore-$vtkmajorminor -lvtkCommonCore-$vtkmajorminor -lvtkCommonDataModel-$vtkmajorminor \
                                           -lvtkFiltersCore-$vtkmajorminor -lvtkIOXML-$vtkmajorminor -lvtkImagingCore-$vtkmajorminor \
                                           -lvtkIOImage-$vtkmajorminor -lvtkImagingMath-$vtkmajorminor -lvtkIOParallelXML-$vtkmajorminor \

- -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor" + -lvtkParallelMPI-$vtkmajorminor -lvtkParallelCore-$vtkmajorminor \ + -lvtkCommonExecutionModel-$vtkmajorminor"

                                                                    VTK_LIBRARY_NO_VERSION="-L$VTK_LIB -lvtkIOCore -lvtkCommonCore -lvtkCommonDataModel \
                                         -lvtkFiltersCore -lvtkIOXML -lvtkImagingCore \
                                         -lvtkIOImage -lvtkImagingMath -lvtkIOParallelXML \

- -lvtkParallelMPI -lvtkParallelCore" + -lvtkParallelMPI -lvtkParallelCore -lvtkCommonExecutionModel"

fi

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