Difference between revisions of "VEP"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
|||
Line 35: | Line 35: | ||
--> | --> | ||
==System Variables== | ==System Variables== | ||
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== |
Revision as of 21:29, 6 December 2019
Description
Use Variant Effect Predictor (VEP) to analyse your variation data locally. No limits, powerful, fast and extendable. VEP is the best way to get the most out of the Ensembl.
Required Modules
Serial
- vep
System Variables
- HPC_VEP_DIR - installation directory
Citation
If you publish research that uses vep you have to cite it as follows:
McLaren et. al. (doi:10.1093/bioinformatics/btq330)
Validation
- Validated 4/5/2018