Difference between revisions of "TEMP"
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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|temp}} |{{#vardefine:url|https://github.com/JialiUMassWengLab/TEMP}} <!--CON...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_EXE - example directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:29, 6 December 2019
Description
TEMP is a software package for detecting transposable elements (TEs) insertions and absences from pooled high-throughput sequencing data
Environment Modules
Run module spider temp to find out what environment modules are available for this application.
System Variables
- HPC_TEMP_DIR - installation directory
- HPC_TEMP_BIN - executable directory
- HPC_TEMP_DOC - documentation directory
- HPC_TEMP_EXE - example directory