SNAPE-pooled: Difference between revisions
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==System Variables== | ==System Variables== | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:24, 6 December 2019
Description
SNAPE-pooled computes the probability distribution for the frequency of the minor allele in a certain population, at a certain position in the genome. If this probability is high enough, then you have a segregating position, a.k.a. SNP.
Required Modules
Serial
- snape-pooled
System Variables
- HPC_SNAPE-POOLED_DIR - installation directory
Validation
- Validate 4/5/2018