Difference between revisions of "SNAPE-pooled"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:24, 6 December 2019

Description

snape-pooled website  

SNAPE-pooled computes the probability distribution for the frequency of the minor allele in a certain population, at a certain position in the genome. If this probability is high enough, then you have a segregating position, a.k.a. SNP.


Required Modules

Serial

  • snape-pooled

System Variables

  • HPC_SNAPE-POOLED_DIR - installation directory





Validation

  • Validate 4/5/2018