Difference between revisions of "MitoFinder"
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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mitofinder}} |{{#vardefine:url|https://gitlab.com/RemiAllio/mitofinder/tree/...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:23, 6 December 2019
Description
Mitofinder is a pipeline to assemble mitochondrial genomes and extract mitochondrial genes from trimmed sequencing read data.
Environment Modules
Run module spider mitofinder to find out what environment modules are available for this application.
System Variables
- HPC_MITOFINDER_DIR - installation directory
- HPC_MITOFINDER_BIN - executable directory