Difference between revisions of "Newbler"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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*{{#var:app}} | *{{#var:app}} | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
* HPC_NEWBLER_BIN - executable directory | * HPC_NEWBLER_BIN - executable directory | ||
<!--Run--> | <!--Run--> | ||
Revision as of 21:22, 6 December 2019
Description
Newbler is a software package for de novo DNA sequence assembly. It is designed specifically for assembling sequence data generated by the 454 GS-series of pyrosequencing platforms sold by 454 Life Sciences, a Roche Diagnostics company.
Required Modules
Serial
- newbler
System Variables
- HPC_NEWBLER_DIR - installation directory
- HPC_NEWBLER_BIN - executable directory
Validation
- Validated 4/5/2018