Difference between revisions of "MetaSV"

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(Created page with "Category:SoftwareCategory:BiologyCategory:PhylogeneticsCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|metasv}} |{{#vardefine:url|https://githu...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

metasv website  

MetaSV: An accurate and integrative structural-variant caller for next generation sequencing

Environment Modules

Run module spider metasv to find out what environment modules are available for this application.

System Variables

  • HPC_METASV_DIR - installation directory
  • HPC_METASV_BIN - executable directory




Citation

If you publish research that uses metasv you have to cite it as follows:

Marghoob Mohiyuddin, John C. Mu, Jian Li, Narges Bani Asadi, Mark B. Gerstein, Alexej Abyzov, Wing H. Wong, and Hugo Y.K. Lam