Difference between revisions of "EMMAX"
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==System Variables== | ==System Variables== | ||
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Revision as of 21:20, 6 December 2019
Description
EMMAX is a statistical test for large scale human or model organism association mapping accounting for the sample structure. In addition to the computational efficiency obtained by EMMA algorithm, EMMAX takes advantage of the fact that each loci explains only a small fraction of complex traits, which allows us to avoid repetitive variance component estimation procedure, resulting in a significant amount of increase in computational time of association mapping using mixed model.
Required Modules
Serial
- emmax
Parallel (OpenMP)
- intel/2013.sp1.3.174
- emmax
System Variables
- HPC_EMMAX_DIR - installation directory