Difference between revisions of "EQTLA"

From UFRC
Jump to navigation Jump to search
m (Text replacement - "#uppercase" to "uc")
Line 33: Line 33:
 
-->
 
-->
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR
+
* HPC_{{uc:{{#var:app}}}}_DIR
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:20, 6 December 2019

Description

eqtla website  

The core motivation behind the design of eQTLA was to create a tool which can efficiently perform eQTL analysis. eQTLA is capable of performing both cis- and trans-eQTL analysis given a set of raw genetic marker data and expression values.

Required Modules

Serial

  • eqtla

System Variables

  • HPC_EQTLA_DIR





Validation

  • Validated 4/5/2018