Difference between revisions of "Bam-Readcount"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:18, 6 December 2019

Description

bam-readcount website  

The purpose of this program is to generate metrics at single nucleotide positions. There are number of metrics generated which can be useful for filtering out false positive calls.

Required Modules

Serial

  • bam-readcount

System Variables

  • HPC_BAM-READCOUNT_DIR - installation directory