Difference between revisions of "Breakseq"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|breakseq}} |{{#vardefine:url|https://github.com/bioinfor...")
 
m (Text replacement - "#uppercase" to "uc")
 
Line 24: Line 24:
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:15, 6 December 2019

Description

breakseq website  

BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants

Environment Modules

Run module spider breakseq to find out what environment modules are available for this application.

System Variables

  • HPC_BREAKSEQ_DIR - installation directory
  • HPC_BREAKSEQ_BIN - executable directory