ChromEvol: Difference between revisions
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==System Variables== | ==System Variables== | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_DIR | ||
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{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:03, 6 December 2019
Description
chromEvol is a free, open-source program for analyzing changes in chromosome-number along a phylogeny. Given a phylogeny and chromosome number data, the program infers the location and type of chromosome number transitions along the tree.
- Features
- Test hypotheses about chromosome numbe evolution
- Determine ploidy levels for taxa
- Find the chromosome base-number of a phylogeny
Required Modules
Serial
- chromevol
System Variables
- HPC_CHROMEVOL_DIR
Citation
If you publish research that uses chromevol you have to cite it as follows:
Validation
- Validated 4/5/2018