3PCLR: Difference between revisions
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Moskalenko (talk | contribs) m Text replacement - "#uppercase" to "uc" |
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==System Variables== | ==System Variables== | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_EXE - example directory | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:02, 6 December 2019
Description
3P-CLR is a method to detect positive selection in a three-population tree using patterns of linked allele frequency differentiation. It can distinguish selective events that occurred in the common ancestral population of the two most closely-related populations from those events that occurred in each of the populations after the split from each other.
Required Modules
Serial
- 3pclr
System Variables
- HPC_3PCLR_DIR - installation directory
- HPC_3PCLR_BIN - executable directory
- HPC_3PCLR_DOC - documentation directory
- HPC_3PCLR_EXE - example directory