Difference between revisions of "GCTA"
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Revision as of 21:04, 5 April 2018
Description
GCTA (Genome-wide Complex Trait Analysis) was originally designed to estimate the proportion of phenotypic variance explained by genome- or chromosome-wide SNPs for complex traits (the GREML method), and has subsequently extended for many other analyses to better understand the genetic architecture of complex traits.
Required Modules
Serial
- gcta
System Variables
- HPC_{{#uppercase:gcta}}_DIR - installation directory
Citation
If you publish research that uses gcta you have to cite it as follows:
Full list of citations covering the methods used by the software is available from the project website.
Validation
- Validate 4/5/2018