Difference between revisions of "Fastx Toolkit"
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The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. | The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. | ||
<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
| − | |||
| − | |||
==System Variables== | ==System Variables== | ||
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | ||
Revision as of 19:47, 16 February 2018
Description
The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.
Environment Modules
Run module spider fastx_toolkit to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:fastx_toolkit}}_DIR - installation directory
- HPC_FASTX_TOOLKIT_BIN - executable directory