Difference between revisions of "Diamond"
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(Created page with "Category:SoftwareCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|diamond}} |{{#vardefine:url| http://ab.inf.uni-tuebingen.de/software/diamond/}} <...") |
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speed of BLASTX, with little loss of sensitivity. | speed of BLASTX, with little loss of sensitivity. | ||
| + | See the [https://github.com/bbuchfink/diamond/raw/master/diamond_manual.pdf full PDF Diamond Manual] for usage details. | ||
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Revision as of 15:56, 2 November 2016
Description
DIAMOND is a new high-throughput program for aligning a file of NGS reads against a protein reference database such as NR, at up to 16000 times the speed of BLASTX, with little loss of sensitivity.
See the full PDF Diamond Manual for usage details.
Required Modules
Serial
- diamond
System Variables
- HPC_{{#uppercase:diamond}}_DIR - installation directory