Difference between revisions of "Canu"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Sequencing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|canu}} |{{#vardefine:url|http://canu.readthedocs.org/en/lat...")
 
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* {{#var:app}}
 
* {{#var:app}}
 
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* gcc/4.7.2
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* gcc/5.2.0
 
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===Parallel (OpenMP)===
 
===Parallel (OpenMP)===

Revision as of 20:25, 28 March 2016

Description

canu website  

Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION).

Required Modules

Serial

  • canu
  • gcc/4.7.2
  • gcc/5.2.0

System Variables

  • HPC_{{#uppercase:canu}}_DIR - installation directory