Difference between revisions of "Proovread"
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(Created page with "Category:SoftwareCategory:BioinformaticsCategory:GenomicsCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Proovread}} |{{#vardefine:url|http://p...") |
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| − | |{{#vardefine:exe|}} <!--ADDITIONAL INFO--> | + | |{{#vardefine:exe|1}} <!--ADDITIONAL INFO--> |
|{{#vardefine:pbs|}} <!--PBS SCRIPTS--> | |{{#vardefine:pbs|}} <!--PBS SCRIPTS--> | ||
|{{#vardefine:policy|}} <!--POLICY--> | |{{#vardefine:policy|}} <!--POLICY--> | ||
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{{#if: {{#var: exe}}|==Additional Information== | {{#if: {{#var: exe}}|==Additional Information== | ||
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| + | For advanced usage copy the configuration file from $HPC_PROOVREAD_CONF to your working directory and adjust as needed for the analysis at hand. | ||
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<!--PBS scripts--> | <!--PBS scripts--> | ||
Revision as of 16:51, 6 August 2014
Description
Large scale high-accuracy BioPac correction through iterative short read consensus.
Required Modules
Serial
- Proovread
System Variables
- HPC_{{#uppercase:Proovread}}_DIR
- HPC_{{#uppercase:Proovread}}_BIN
- HPC_{{#uppercase:Proovread}}_CONF
Additional Information
For advanced usage copy the configuration file from $HPC_PROOVREAD_CONF to your working directory and adjust as needed for the analysis at hand.