Difference between revisions of "CAP3"
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | ||
| − | CAP3 is a sequence assembly program | + | CAP3 is a sequence assembly program. |
Intel processor optimized versions of cap3 and formcon are installed at HPC. | Intel processor optimized versions of cap3 and formcon are installed at HPC. | ||
Revision as of 16:31, 17 January 2013
Description
CAP3 is a sequence assembly program.
Intel processor optimized versions of cap3 and formcon are installed at HPC.
Opteron optimized versions of these binaries are named cap3-opteron and formcon-opteron.
In addition, pcap binaries are also provided.
Required Modules
Serial
- cap3
System Variables
- HPC_{{#uppercase:cap3}}_DIR - installation directory
- HPC_CAP3_BIN - location of the CAP3 executables directory
- HPC_CAP3_DOC - location of the CAP3 docs directory
- HPC_CAP3_EXAMPLE - location of the CAP3 examples directory