Difference between revisions of "Fastx Toolkit"
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The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. | The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. | ||
| − | + | <!--Modules--> | |
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==Required Modules== | ==Required Modules== | ||
[[Modules|modules documentation]] | [[Modules|modules documentation]] | ||
===Serial=== | ===Serial=== | ||
*{{#var:app}} | *{{#var:app}} | ||
| + | ==System Variables== | ||
| + | * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | ||
* HPC_FASTX_TOOLKIT_BIN - executable directory | * HPC_FASTX_TOOLKIT_BIN - executable directory | ||
{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
Revision as of 18:21, 10 August 2012
Description
The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.
Required Modules
Serial
- fastx_toolkit
System Variables
- HPC_{{#uppercase:fastx_toolkit}}_DIR - installation directory
- HPC_FASTX_TOOLKIT_BIN - executable directory