BFAST: Difference between revisions
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m Text replace - "{{#if: {{#var: mod}}|==Execution Environment and Modules== {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}}" to "==Required Modules== modules documentation ===Serial=== *{{#var:app}}" |
Moskalenko (talk | contribs) No edit summary |
||
| Line 40: | Line 40: | ||
===Serial=== | ===Serial=== | ||
*{{#var:app}} | *{{#var:app}} | ||
==System Variables== | |||
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | |||
* HPC_BFAST_BIN - executable directory | * HPC_BFAST_BIN - executable directory | ||
* HPC_BFAST_DOC - documentation directory | * HPC_BFAST_DOC - documentation directory | ||
{{#if: {{#var: exe}}|== | <!--Additional--> | ||
{{#if: {{#var: exe}}|==Additional Information== | |||
WRITE INSTRUCTIONS ON RUNNING THE ACTUAL BINARY|}} | WRITE INSTRUCTIONS ON RUNNING THE ACTUAL BINARY|}} | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 17:35, 10 August 2012
Description
BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.
Required Modules
Serial
- bfast
System Variables
- HPC_{{#uppercase:bfast}}_DIR - installation directory
- HPC_BFAST_BIN - executable directory
- HPC_BFAST_DOC - documentation directory