Newbler: Difference between revisions
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Moskalenko (talk | contribs) m Text replace - "Usage policy" to "Usage Policy" |
Moskalenko (talk | contribs) m Text replace - "{{#if: {{#var: mod}}|==Execution Environment and Modules== {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}}" to "==Required Modules== modules documentation ===Serial=== *{{#var:app}}" |
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<!--Modules--> | <!--Modules--> | ||
==Required Modules== | |||
[[Modules|modules documentation]] | |||
===Serial=== | |||
*{{#var:app}} | |||
<!--Add additional HPC_FOO_BIN and other ENV VARIABLES below--> | <!--Add additional HPC_FOO_BIN and other ENV VARIABLES below--> | ||
* HPC_NEWBLER_BIN - executable directory | * HPC_NEWBLER_BIN - executable directory | ||
Revision as of 16:55, 10 August 2012
Description
Newbler is a software package for de novo DNA sequence assembly. It is designed specifically for assembling sequence data generated by the 454 GS-series of pyrosequencing platforms sold by 454 Life Sciences, a Roche Diagnostics company.
Required Modules
Serial
- newbler
- HPC_NEWBLER_BIN - executable directory