Difference between revisions of "Fastx Toolkit"
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The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. | The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. | ||
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==Installed Versions== | ==Installed Versions== | ||
* 0.0.13.1 | * 0.0.13.1 | ||
Revision as of 01:59, 10 August 2012
Description
The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.
Installed Versions
- 0.0.13.1
Running the application using modules
To use fastx_toolkit with the environment modules system at HPC the following commands are available:
Get module information for fastx toolkit:
$module spider fastx_toolkit
Load the default application module:
$module load fastx_toolkit
The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:
- HPC_FASTX_TOOLKIT_DIR - directory where fastx_toolkit is located.
- HPC_FASTX_TOOLKIT_BIN - executable directory