Difference between revisions of "CViT"
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|{{#vardefine:app|CViT}} | |{{#vardefine:app|CViT}} | ||
Latest revision as of 12:09, 26 August 2022
Description
ViT is a Perl script used to quickly generate images that show features on genomic sequence. It is intentionally simplistic and low-tech; there are limitless possibilities for how one might view such data and CViT is optimized for speed and ease of use over high-tech features.
Environment Modules
Run module spider CViT to find out what environment modules are available for this application.
System Variables
- HPC_CVIT_DIR - installation directory
- HPC_CVIT_BIN - executable directory
Citation
If you publish research that uses CViT you have to cite it as follows:
Chromosome Visualization Tool: A Whole Genome Viewer