Difference between revisions of "SNAPE-pooled"
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| − | [[Category:Software]][[Category:Biology]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Variant Calling]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|snape-pooled}} | |{{#vardefine:app|snape-pooled}} | ||
Latest revision as of 12:56, 15 August 2022
Description
SNAPE-pooled computes the probability distribution for the frequency of the minor allele in a certain population, at a certain position in the genome. If this probability is high enough, then you have a segregating position, a.k.a. SNP.
Environment Modules
Run module spider snape-pooled to find out what environment modules are available for this application.
System Variables
- HPC_SNAPE-POOLED_DIR - installation directory