Difference between revisions of "Nimare"
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Latest revision as of 15:27, 15 August 2022
Description
nimare website
NiMARE is a Python package for performing meta-analyses, and derivative analyses using meta-analytic data, of the neuroimaging literature. While meta-analytic packages exist which implement one or two algorithms each, NiMARE provides a standard syntax for performing a wide range of analyses and for interacting with databases of coordinates and images from fMRI studies (e.g., brainspell, Neurosynth, and NeuroVault).
https://github.com/neurostuff/NiMARE
Environment Modules
Run module spider nimare to find out what environment modules are available for this application.
System Variables
- HPC_NIMARE_DIR - installation directory
- HPC_NIMARE_BIN - executable directory
Citation
If you publish research that uses nimare you have to cite it as follows:
NiMARE provides several workflows as command-line interfaces, including ALE meta-analysis, meta-analytic coactivation modeling (MACM) analysis, peaks2maps image reconstruction, and contrast map meta-analysis. Each workflow should generate a boilerplate paragraph with details about the workflow and citations that can be used in a manuscript.