Difference between revisions of "AGfusion"
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Revision as of 21:31, 26 August 2020
Description
AGFusion is a python package for annotating gene fusions from the human or mouse genomes. AGFusion simply needs the reference genome, the two gene partners, and the fusion junction coordinates as input, and outputs the following:
Environment Modules
Run module spider agfusion to find out what environment modules are available for this application.
System Variables
- HPC_AGFUSION_DIR - installation directory
- HPC_AGFUSION_BIN - executable directory
Citation
If you publish research that uses agfusion you have to cite it as follows:
https://www.biorxiv.org/content/10.1101/080903v1